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qtl2pleio

Testing Pleiotropy in Multiparental Populations

We implement an adaptation of Jiang & Zeng's (1995) <https://www.genetics.org/content/140/3/1111> likelihood ratio test for testing the null hypothesis of pleiotropy against the alternative hypothesis, two separate quantitative trait loci. The test differs from that in Jiang & Zeng (1995) <https://www.genetics.org/content/140/3/1111> and that in Tian et al. (2016) <doi:10.1534/genetics.115.183624> in that our test accommodates multiparental populations.

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VersionRepositoryFileSize
1.4.3 rolling linux/jammy R-4.5 qtl2pleio_1.4.3.tar.gz 354.4 KiB
1.4.3 rolling linux/noble R-4.5 qtl2pleio_1.4.3.tar.gz 362.8 KiB
1.4.3 rolling source/ R- qtl2pleio_1.4.3.tar.gz 132.9 KiB
1.4.3 latest linux/jammy R-4.5 qtl2pleio_1.4.3.tar.gz 354.4 KiB
1.4.3 latest linux/noble R-4.5 qtl2pleio_1.4.3.tar.gz 362.8 KiB
1.4.3 latest source/ R- qtl2pleio_1.4.3.tar.gz 132.9 KiB
1.4.4 2026-04-26 source/ R- qtl2pleio_1.4.4.tar.gz 124.8 KiB
1.4.3 2026-04-23 source/ R- qtl2pleio_1.4.3.tar.gz 132.9 KiB
1.4.3 2026-04-09 windows/windows R-4.5 qtl2pleio_1.4.3.zip 673.8 KiB
1.4.3 2025-04-20 source/ R- qtl2pleio_1.4.3.tar.gz 132.9 KiB

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