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gemma2

GEMMA Multivariate Linear Mixed Model

Fits a multivariate linear mixed effects model that uses a polygenic term, after Zhou & Stephens (2014) (<https://www.nature.com/articles/nmeth.2848>). Of particular interest is the estimation of variance components with restricted maximum likelihood (REML) methods. Genome-wide efficient mixed-model association (GEMMA), as implemented in the package 'gemma2', uses an expectation-maximization algorithm for variance components inference for use in quantitative trait locus studies.

Versions across snapshots

VersionRepositoryFileSize
0.1.3 rolling source/ R- gemma2_0.1.3.tar.gz 448.2 KiB
0.1.3 rolling linux/jammy R-4.5 gemma2_0.1.3.tar.gz 474.3 KiB
0.1.3 latest source/ R- gemma2_0.1.3.tar.gz 448.2 KiB
0.1.3 latest linux/jammy R-4.5 gemma2_0.1.3.tar.gz 474.3 KiB
0.1.3 2026-04-23 source/ R- gemma2_0.1.3.tar.gz 448.2 KiB
0.1.3 2026-04-09 windows/windows R-4.5 gemma2_0.1.3.zip 473.4 KiB
0.1.3 2025-04-20 source/ R- gemma2_0.1.3.tar.gz 448.2 KiB

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