inDAGO
A GUI for Dual and Bulk RNA-Sequencing Analysis
A 'shiny' app that supports both dual and bulk RNA-seq, with the dual RNA-seq functionality offering the flexibility to perform either a sequential approach (where reads are mapped separately to each genome) or a combined approach (where reads are aligned to a single merged genome). The user-friendly interface automates the analysis process, providing step-by-step guidance, making it easy for users to navigate between different analysis steps, and download intermediate results and publication-ready plots.
Versions across snapshots
| Version | Repository | File | Size |
|---|---|---|---|
1.0.3 |
rolling source/ R- | inDAGO_1.0.3.tar.gz |
433.3 KiB |
1.0.3 |
rolling linux/noble R-4.5 | inDAGO_1.0.3.tar.gz |
1.0 MiB |
1.0.3 |
rolling linux/jammy R-4.5 | inDAGO_1.0.3.tar.gz |
1.0 MiB |
1.0.3 |
latest source/ R- | inDAGO_1.0.3.tar.gz |
433.3 KiB |
1.0.3 |
latest linux/jammy R-4.5 | inDAGO_1.0.3.tar.gz |
1.0 MiB |
1.0.3 |
latest linux/noble R-4.5 | inDAGO_1.0.3.tar.gz |
1.0 MiB |
1.0.3 |
2026-04-26 source/ R- | inDAGO_1.0.3.tar.gz |
433.3 KiB |
1.0.3 |
2026-04-23 source/ R- | inDAGO_1.0.3.tar.gz |
433.3 KiB |
1.0.3 |
2026-04-09 windows/windows R-4.5 | inDAGO_1.0.3.zip |
1.0 MiB |
Dependencies (latest)
Imports
- bigtabulate
- bsicons
- bslib
- callr
- checkmate
- data.table
- dplyr
- DT
- fs
- ggplot2
- ggrepel
- grDevices
- heatmaply
- Hmisc
- htmltools
- magrittr
- matrixStats
- memuse
- methods
- paletteer
- parallel
- pheatmap
- plotly
- R.devices
- readr
- reshape2
- rintrojs
- seqinr
- shiny
- shinycssloaders
- shinyFiles
- shinyjs
- shinyWidgets
- spsComps
- stats
- svglite
- tibble
- tidyr
- tools
- upsetjs
- UpSetR
- utils