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agvgd

An R Implementation of the 'Align-GVGD' Method

'Align-GVGD' ('A-GVGD') is a method to predict the impact of 'missense' substitutions based on the properties of amino acid side chains and protein multiple sequence alignments <doi:10.1136/jmg.2005.033878>. 'A-GVGD' is an extension of the original 'Grantham' distance to multiple sequence alignments. This package provides an alternative R implementation to the web version found on <http://agvgd.hci.utah.edu/>.

Versions across snapshots

VersionRepositoryFileSize
0.1.2 rolling linux/jammy R-4.5 agvgd_0.1.2.tar.gz 1.3 MiB
0.1.2 rolling linux/noble R-4.5 agvgd_0.1.2.tar.gz 1.3 MiB
0.1.2 rolling source/ R- agvgd_0.1.2.tar.gz 1.3 MiB
0.1.2 latest linux/jammy R-4.5 agvgd_0.1.2.tar.gz 1.3 MiB
0.1.2 latest linux/noble R-4.5 agvgd_0.1.2.tar.gz 1.3 MiB
0.1.2 latest source/ R- agvgd_0.1.2.tar.gz 1.3 MiB
0.1.2 2026-04-26 source/ R- agvgd_0.1.2.tar.gz 1.3 MiB
0.1.2 2026-04-23 source/ R- agvgd_0.1.2.tar.gz 1.3 MiB
0.1.2 2026-04-09 windows/windows R-4.5 agvgd_0.1.2.zip 1.3 MiB
0.1.2 2025-04-20 source/ R- agvgd_0.1.2.tar.gz 1.3 MiB

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