ulrb
Unsupervised Learning Based Definition of Microbial Rare Biosphere
A tool to define the rare biosphere. 'ulrb' solves the problem of the definition of rarity by replacing arbitrary thresholds with an unsupervised machine learning algorithm (partitioning around medoids, or k-medoids). This algorithm works for any type of microbiome data, provided there is an abundance table. This method also works for non-microbiome data.
Versions across snapshots
| Version | Repository | File | Size |
|---|---|---|---|
0.1.8 |
rolling linux/jammy R-4.5 | ulrb_0.1.8.tar.gz |
1.5 MiB |
0.1.8 |
rolling linux/noble R-4.5 | ulrb_0.1.8.tar.gz |
1.5 MiB |
0.1.8 |
rolling source/ R- | ulrb_0.1.8.tar.gz |
1.4 MiB |
0.1.8 |
latest linux/jammy R-4.5 | ulrb_0.1.8.tar.gz |
1.5 MiB |
0.1.8 |
latest linux/noble R-4.5 | ulrb_0.1.8.tar.gz |
1.5 MiB |
0.1.8 |
latest source/ R- | ulrb_0.1.8.tar.gz |
1.4 MiB |
0.1.8 |
2026-04-26 source/ R- | ulrb_0.1.8.tar.gz |
1.4 MiB |
0.1.8 |
2026-04-23 source/ R- | ulrb_0.1.8.tar.gz |
1.4 MiB |
0.1.8 |
2026-04-09 windows/windows R-4.5 | ulrb_0.1.8.zip |
1.5 MiB |
0.1.6 |
2025-04-20 source/ R- | ulrb_0.1.6.tar.gz |
1.4 MiB |