superspreading
Understand Individual-Level Variation in Infectious Disease Transmission
Estimate and understand individual-level variation in transmission. Implements density and cumulative compound Poisson discrete distribution functions (Kremer et al. (2021) <doi:10.1038/s41598-021-93578-x>), as well as functions to calculate infectious disease outbreak statistics given epidemiological parameters on individual-level transmission; including the probability of an outbreak becoming an epidemic/extinct (Kucharski et al. (2020) <doi:10.1016/S1473-3099(20)30144-4>), or the cluster size statistics, e.g. what proportion of cases cause X\% of transmission (Lloyd-Smith et al. (2005) <doi:10.1038/nature04153>).
Versions across snapshots
| Version | Repository | File | Size |
|---|---|---|---|
0.4.0 |
rolling linux/jammy R-4.5 | superspreading_0.4.0.tar.gz |
940.3 KiB |
0.4.0 |
rolling linux/noble R-4.5 | superspreading_0.4.0.tar.gz |
940.0 KiB |
0.4.0 |
rolling source/ R- | superspreading_0.4.0.tar.gz |
898.8 KiB |
0.4.0 |
latest linux/jammy R-4.5 | superspreading_0.4.0.tar.gz |
940.3 KiB |
0.4.0 |
latest linux/noble R-4.5 | superspreading_0.4.0.tar.gz |
940.0 KiB |
0.4.0 |
latest source/ R- | superspreading_0.4.0.tar.gz |
898.8 KiB |
0.4.0 |
2026-04-26 source/ R- | superspreading_0.4.0.tar.gz |
898.8 KiB |
0.4.0 |
2026-04-23 source/ R- | superspreading_0.4.0.tar.gz |
898.8 KiB |
0.4.0 |
2026-04-09 windows/windows R-4.5 | superspreading_0.4.0.zip |
955.3 KiB |
0.3.0 |
2025-04-20 source/ R- | superspreading_0.3.0.tar.gz |
648.7 KiB |