sccore
Core Utilities for Single-Cell RNA-Seq
Core utilities for single-cell RNA-seq data analysis. Contained within are utility functions for working with differential expression (DE) matrices and count matrices, a collection of functions for manipulating and plotting data via 'ggplot2', and functions to work with cell graphs and cell embeddings. Graph-based methods include embedding kNN cell graphs into a UMAP <doi:10.21105/joss.00861>, collapsing vertices of each cluster in the graph, and propagating graph labels.
Versions across snapshots
| Version | Repository | File | Size |
|---|---|---|---|
1.0.7 |
rolling source/ R- | sccore_1.0.7.tar.gz |
370.4 KiB |
1.0.7 |
rolling linux/jammy R-4.5 | sccore_1.0.7.tar.gz |
856.1 KiB |
1.0.7 |
rolling linux/noble R-4.5 | sccore_1.0.7.tar.gz |
861.3 KiB |
1.0.7 |
latest source/ R- | sccore_1.0.7.tar.gz |
370.4 KiB |
1.0.7 |
latest linux/jammy R-4.5 | sccore_1.0.7.tar.gz |
856.1 KiB |
1.0.7 |
latest linux/noble R-4.5 | sccore_1.0.7.tar.gz |
861.3 KiB |
1.0.7 |
2026-04-26 source/ R- | sccore_1.0.7.tar.gz |
370.4 KiB |
1.0.7 |
2026-04-23 source/ R- | sccore_1.0.7.tar.gz |
370.4 KiB |
1.0.7 |
2026-04-09 windows/windows R-4.5 | sccore_1.0.7.zip |
1.2 MiB |
1.0.6 |
2025-04-20 source/ R- | sccore_1.0.6.tar.gz |
369.2 KiB |