rabhit
Inference Tool for Antibody Haplotype
Infers V-D-J (Variable-Diversity-Joining) haplotypes and gene deletions from AIRR-seq (Adaptive Immune Receptor Repertoire sequencing) data for Ig (Immunoglobulin) and TR (T cell Receptor) chains, based on J (Joining), D (Diversity), or V (Variable) genes as anchor, by adapting a Bayesian framework. It also calculates a Bayes factor, a number that indicates the certainty level of the inference, for each haplotyped gene. Citation: Gidoni, et al (2019) <doi:10.1038/s41467-019-08489-3>. Peres and Gidoni, et al (2019) <doi:10.1093/bioinformatics/btz481>.
Versions across snapshots
| Version | Repository | File | Size |
|---|---|---|---|
0.4.0 |
rolling linux/jammy R-4.5 | rabhit_0.4.0.tar.gz |
1.7 MiB |
0.4.0 |
rolling linux/noble R-4.5 | rabhit_0.4.0.tar.gz |
1.6 MiB |
0.4.0 |
rolling source/ R- | rabhit_0.4.0.tar.gz |
2.5 MiB |
0.4.0 |
latest linux/jammy R-4.5 | rabhit_0.4.0.tar.gz |
1.7 MiB |
0.4.0 |
latest linux/noble R-4.5 | rabhit_0.4.0.tar.gz |
1.6 MiB |
0.4.0 |
latest source/ R- | rabhit_0.4.0.tar.gz |
2.5 MiB |
0.4.0 |
2026-04-23 source/ R- | rabhit_0.4.0.tar.gz |
0 B |