qch
Query Composite Hypotheses
Provides functions for the joint analysis of Q sets of p-values obtained for the same list of items. This joint analysis is performed by querying a composite hypothesis, i.e. an arbitrary complex combination of simple hypotheses, as described in Mary-Huard et al. (2021) <doi:10.1093/bioinformatics/btab592> and De Walsche et al.(2025) <doi: 10.1093/nargab/lqaf118>. In this approach, the Q-uplet of p-values associated with each item is distributed as a multivariate mixture, where each of the 2^Q components corresponds to a specific combination of simple hypotheses. The dependence between the p-value series is considered using a Gaussian copula function. A p-value for the composite hypothesis test is derived from the posterior probabilities.
Versions across snapshots
| Version | Repository | File | Size |
|---|---|---|---|
2.1.2 |
rolling linux/jammy R-4.5 | qch_2.1.2.tar.gz |
333.7 KiB |
2.1.2 |
rolling linux/noble R-4.5 | qch_2.1.2.tar.gz |
333.7 KiB |
2.1.2 |
rolling source/ R- | qch_2.1.2.tar.gz |
333.7 KiB |
2.1.2 |
latest linux/jammy R-4.5 | qch_2.1.2.tar.gz |
333.7 KiB |
2.1.2 |
latest linux/noble R-4.5 | qch_2.1.2.tar.gz |
333.7 KiB |
2.1.2 |
latest source/ R- | qch_2.1.2.tar.gz |
333.7 KiB |
2.1.2 |
2026-04-26 source/ R- | qch_2.1.2.tar.gz |
333.7 KiB |
2.1.2 |
2026-04-23 source/ R- | qch_2.1.2.tar.gz |
333.7 KiB |
2.0.0 |
2025-04-20 source/ R- | qch_2.0.0.tar.gz |
330.5 KiB |