Crandore Hub

nosoi

A Forward Agent-Based Transmission Chain Simulator

The aim of 'nosoi' (pronounced no.si) is to provide a flexible agent-based stochastic transmission chain/epidemic simulator (Lequime et al. Methods in Ecology and Evolution 11:1002-1007). It is named after the daimones of plague, sickness and disease that escaped Pandora's jar in the Greek mythology. 'nosoi' is able to take into account the influence of multiple variable on the transmission process (e.g. dual-host systems (such as arboviruses), within-host viral dynamics, transportation, population structure), alone or taken together, to create complex but relatively intuitive epidemiological simulations.

Versions across snapshots

VersionRepositoryFileSize
1.1.2 rolling linux/jammy R-4.5 nosoi_1.1.2.tar.gz 900.0 KiB
1.1.2 rolling linux/noble R-4.5 nosoi_1.1.2.tar.gz 900.6 KiB
1.1.2 rolling source/ R- nosoi_1.1.2.tar.gz 763.0 KiB
1.1.2 latest linux/jammy R-4.5 nosoi_1.1.2.tar.gz 900.0 KiB
1.1.2 latest linux/noble R-4.5 nosoi_1.1.2.tar.gz 900.6 KiB
1.1.2 latest source/ R- nosoi_1.1.2.tar.gz 763.0 KiB
1.1.2 2026-04-26 source/ R- nosoi_1.1.2.tar.gz 763.0 KiB
1.1.2 2026-04-23 source/ R- nosoi_1.1.2.tar.gz 763.0 KiB
1.1.2 2026-04-09 windows/windows R-4.5 nosoi_1.1.2.zip 910.8 KiB
1.1.2 2025-04-20 source/ R- nosoi_1.1.2.tar.gz 763.0 KiB

Dependencies (latest)

Depends

Imports

Suggests