immunogenetr
A Comprehensive Toolkit for Clinical HLA Informatics
A comprehensive toolkit for clinical Human Leukocyte Antigen (HLA) informatics, built on 'tidyverse' <https://tidyverse.tidyverse.org/> principles and making use of genotype list string (GL string, Mack et al. (2023) <doi:10.1111/tan.15126>) for storing and computing HLA genotype data. Specific functionalities include: coercion of HLA data in tabular format to and from GL string; calculation of matching and mismatching in all directions, with multiple output formats; automatic formatting of HLA data for searching within a GL string; truncation of molecular HLA data to a specific number of fields; and reading HLA genotypes in HML files and extracting the GL string. This library is intended for research use. Any application making use of this package in a clinical setting will need to be independently validated according to local regulations.
Versions across snapshots
| Version | Repository | File | Size |
|---|---|---|---|
1.2.0 |
rolling linux/jammy R-4.5 | immunogenetr_1.2.0.tar.gz |
495.3 KiB |
1.2.0 |
rolling linux/noble R-4.5 | immunogenetr_1.2.0.tar.gz |
494.9 KiB |
1.2.0 |
rolling source/ R- | immunogenetr_1.2.0.tar.gz |
446.8 KiB |
1.2.0 |
latest source/ R- | immunogenetr_1.2.0.tar.gz |
446.8 KiB |
1.2.0 |
latest linux/jammy R-4.5 | immunogenetr_1.2.0.tar.gz |
495.3 KiB |
1.2.0 |
latest linux/noble R-4.5 | immunogenetr_1.2.0.tar.gz |
494.9 KiB |
1.2.0 |
2026-04-26 source/ R- | immunogenetr_1.2.0.tar.gz |
446.8 KiB |
1.2.0 |
2026-04-23 source/ R- | immunogenetr_1.2.0.tar.gz |
446.8 KiB |
1.1.0 |
2026-04-09 windows/windows R-4.5 | immunogenetr_1.1.0.zip |
498.0 KiB |
0.1.0 |
2025-04-20 source/ R- | immunogenetr_0.1.0.tar.gz |
412.4 KiB |