geneHummus
A Pipeline to Define Gene Families in Legumes and Beyond
A pipeline with high specificity and sensitivity in extracting proteins from the RefSeq database (National Center for Biotechnology Information). Manual identification of gene families is highly time-consuming and laborious, requiring an iterative process of manual and computational analysis to identify members of a given family. The pipelines implements an automatic approach for the identification of gene families based on the conserved domains that specifically define that family. See Die et al. (2018) <doi:10.1101/436659> for more information and examples.
Versions across snapshots
| Version | Repository | File | Size |
|---|---|---|---|
1.0.11 |
rolling source/ R- | geneHummus_1.0.11.tar.gz |
59.3 KiB |
1.0.11 |
rolling linux/jammy R-4.5 | geneHummus_1.0.11.tar.gz |
87.1 KiB |
1.0.11 |
latest source/ R- | geneHummus_1.0.11.tar.gz |
59.3 KiB |
1.0.11 |
latest linux/jammy R-4.5 | geneHummus_1.0.11.tar.gz |
87.1 KiB |
1.0.11 |
2026-04-23 source/ R- | geneHummus_1.0.11.tar.gz |
59.3 KiB |
1.0.11 |
2026-04-09 windows/windows R-4.5 | geneHummus_1.0.11.zip |
90.5 KiB |
1.0.11 |
2025-04-20 source/ R- | geneHummus_1.0.11.tar.gz |
59.3 KiB |