REFT
Root Exudate Feature Toolkit
Provides tools for molecule-oriented and reaction-centred analysis of root exudate datasets. It supports structural matching based on 'PubChem', calculation of molecular descriptors, and inference of candidate microbe-associated metabolic reactions using Kyoto Encyclopedia of Genes and Genomes ('KEGG') identifiers and Enzyme Commission ('EC') numbers. For background on these databases, see Kanehisa et al. (2023) <doi:10.1093/nar/gkac963> and Kim et al. (2023) <doi:10.1093/nar/gkac956>.
Versions across snapshots
| Version | Repository | File | Size |
|---|---|---|---|
0.1.4 |
rolling linux/jammy R-4.5 | REFT_0.1.4.tar.gz |
65.2 KiB |
0.1.4 |
rolling linux/noble R-4.5 | REFT_0.1.4.tar.gz |
65.1 KiB |
0.1.4 |
rolling source/ R- | REFT_0.1.4.tar.gz |
11.8 KiB |
0.1.4 |
latest linux/jammy R-4.5 | REFT_0.1.4.tar.gz |
65.2 KiB |
0.1.4 |
latest linux/noble R-4.5 | REFT_0.1.4.tar.gz |
65.1 KiB |
0.1.4 |
latest source/ R- | REFT_0.1.4.tar.gz |
11.8 KiB |
0.1.4 |
2026-04-23 source/ R- | REFT_0.1.4.tar.gz |
0 B |