PatientLevelPrediction
Develop Clinical Prediction Models Using the Common Data Model
A user friendly way to create patient level prediction models using the Observational Medical Outcomes Partnership Common Data Model. Given a cohort of interest and an outcome of interest, the package can use data in the Common Data Model to build a large set of features. These features can then be used to fit a predictive model with a number of machine learning algorithms. This is further described in Reps (2017) <doi:10.1093/jamia/ocy032>.
Versions across snapshots
| Version | Repository | File | Size |
|---|---|---|---|
6.6.0 |
rolling linux/jammy R-4.5 | PatientLevelPrediction_6.6.0.tar.gz |
2.2 MiB |
6.6.0 |
rolling linux/noble R-4.5 | PatientLevelPrediction_6.6.0.tar.gz |
2.2 MiB |
6.6.0 |
rolling source/ R- | PatientLevelPrediction_6.6.0.tar.gz |
3.0 MiB |
6.6.0 |
latest linux/jammy R-4.5 | PatientLevelPrediction_6.6.0.tar.gz |
2.2 MiB |
6.6.0 |
latest linux/noble R-4.5 | PatientLevelPrediction_6.6.0.tar.gz |
2.2 MiB |
6.6.0 |
latest source/ R- | PatientLevelPrediction_6.6.0.tar.gz |
3.0 MiB |
6.6.0 |
2026-04-26 source/ R- | PatientLevelPrediction_6.6.0.tar.gz |
3.0 MiB |
6.6.0 |
2026-04-23 source/ R- | PatientLevelPrediction_6.6.0.tar.gz |
3.0 MiB |
6.6.0 |
2026-04-09 windows/windows R-4.5 | PatientLevelPrediction_6.6.0.zip |
2.2 MiB |
6.4.0 |
2025-04-20 source/ R- | PatientLevelPrediction_6.4.0.tar.gz |
2.9 MiB |
Dependencies (latest)
Imports
- Andromeda
- Cyclops (>= 3.0.0)
- DatabaseConnector (>= 6.0.0)
- digest
- dplyr
- FeatureExtraction (>= 3.0.0)
- Matrix
- memuse
- ParallelLogger (>= 2.0.0)
- pROC
- PRROC
- rlang
- SqlRender (>= 1.1.3)
- tidyr
- utils