OncoBayes2
Bayesian Logistic Regression for Oncology Dose-Escalation Trials
Bayesian logistic regression model with optional EXchangeability-NonEXchangeability parameter modelling for flexible borrowing from historical or concurrent data-sources. The safety model can guide dose-escalation decisions for adaptive oncology Phase I dose-escalation trials which involve an arbitrary number of drugs. Please refer to Neuenschwander et al. (2008) <doi:10.1002/sim.3230> and Neuenschwander et al. (2016) <doi:10.1080/19466315.2016.1174149> for details on the methodology.
Versions across snapshots
| Version | Repository | File | Size |
|---|---|---|---|
0.9-4 |
rolling linux/jammy R-4.5 | OncoBayes2_0.9-4.tar.gz |
1.5 MiB |
0.9-4 |
rolling linux/noble R-4.5 | OncoBayes2_0.9-4.tar.gz |
1.6 MiB |
0.9-4 |
rolling source/ R- | OncoBayes2_0.9-4.tar.gz |
531.2 KiB |
0.9-4 |
latest linux/jammy R-4.5 | OncoBayes2_0.9-4.tar.gz |
1.5 MiB |
0.9-4 |
latest linux/noble R-4.5 | OncoBayes2_0.9-4.tar.gz |
1.6 MiB |
0.9-4 |
latest source/ R- | OncoBayes2_0.9-4.tar.gz |
531.2 KiB |
0.9-4 |
2026-04-26 source/ R- | OncoBayes2_0.9-4.tar.gz |
531.2 KiB |
0.9-4 |
2026-04-23 source/ R- | OncoBayes2_0.9-4.tar.gz |
531.2 KiB |
0.9-4 |
2026-04-09 windows/windows R-4.5 | OncoBayes2_0.9-4.zip |
1.9 MiB |
0.9-2 |
2025-04-20 source/ R- | OncoBayes2_0.9-2.tar.gz |
529.4 KiB |
Dependencies (latest)
Depends
- RBesT (>= 1.8-0)
Imports
- methods
- Rcpp (>= 0.12.0)
- RcppParallel (>= 5.0.1)
- rstan (>= 2.32.0)
- rstantools (>= 2.4.0)
- posterior (>= 1.5.0)
- assertthat (>= 0.2.1)
- checkmate
- Formula
- bayesplot (>= 1.4.0)
- ggplot2 (>= 3.0.0)
- dplyr (>= 1.1.0)
- tibble
- tidyr (>= 1.0.0)
- abind
- scales
- rlang (>= 0.3.0)
- tidyselect
- utils
- stats
- matrixStats
- brms
- lifecycle
- grDevices
LinkingTo
- BH (>= 1.75.0)
- Rcpp (>= 0.12.0)
- RcppEigen (>= 0.3.3.3.0)
- RcppParallel (>= 5.0.1)
- rstan (>= 2.32.0)
- StanHeaders (>= 2.32.0)