NeighborFinder
Find Neighbor Species of a Bacteria of Interest in the Human Gut Microbiota
Implementation of the local approach described in Sola et al., 2026 <doi:10.64898/2025.12.05.692507> to identify companion species of a bacteria of interest. From several abundance tables of metagenomic data, 'NeighborFinder' suggests a shortlist of companion species based on the integration of results. A visualization via a network is proposed.
Versions across snapshots
| Version | Repository | File | Size |
|---|---|---|---|
1.0.1 |
rolling linux/jammy R-4.5 | NeighborFinder_1.0.1.tar.gz |
6.6 MiB |
1.0.1 |
rolling linux/noble R-4.5 | NeighborFinder_1.0.1.tar.gz |
6.6 MiB |
1.0.1 |
rolling source/ R- | NeighborFinder_1.0.1.tar.gz |
7.7 MiB |
1.0.1 |
latest linux/jammy R-4.5 | NeighborFinder_1.0.1.tar.gz |
6.6 MiB |
1.0.1 |
latest linux/noble R-4.5 | NeighborFinder_1.0.1.tar.gz |
6.6 MiB |
1.0.1 |
latest source/ R- | NeighborFinder_1.0.1.tar.gz |
7.7 MiB |
1.0.1 |
2026-04-23 source/ R- | NeighborFinder_1.0.1.tar.gz |
0 B |