statgenMPP
QTL Mapping for Multi Parent Populations
For Multi Parent Populations (MPP) Identity By Descend (IBD) probabilities are computed using Hidden Markov Models. These probabilities are then used in a mixed model approach for QTL Mapping as described in Li et al. (<doi:10.1007/s00122-021-03919-7>).
Versions across snapshots
| Version | Repository | File | Size |
|---|---|---|---|
1.0.4 |
rolling linux/jammy R-4.5 | statgenMPP_1.0.4.tar.gz |
2.8 MiB |
1.0.4 |
rolling linux/noble R-4.5 | statgenMPP_1.0.4.tar.gz |
2.8 MiB |
1.0.4 |
rolling source/ R- | statgenMPP_1.0.4.tar.gz |
2.7 MiB |
1.0.4 |
latest linux/jammy R-4.5 | statgenMPP_1.0.4.tar.gz |
2.8 MiB |
1.0.4 |
latest linux/noble R-4.5 | statgenMPP_1.0.4.tar.gz |
2.8 MiB |
1.0.4 |
latest source/ R- | statgenMPP_1.0.4.tar.gz |
2.7 MiB |
1.0.4 |
2026-04-26 source/ R- | statgenMPP_1.0.4.tar.gz |
2.7 MiB |
1.0.4 |
2026-04-23 source/ R- | statgenMPP_1.0.4.tar.gz |
2.7 MiB |
1.0.4 |
2026-04-09 windows/windows R-4.5 | statgenMPP_1.0.4.zip |
2.8 MiB |
1.0.4 |
2025-04-20 source/ R- | statgenMPP_1.0.4.tar.gz |
2.7 MiB |
Dependencies (latest)
Depends
- statgenGWAS (>= 1.0.9)
Imports
- data.table
- foreach
- ggplot2
- gridExtra
- LMMsolver (>= 1.0.5)
- rlang
- scales
- spam
- statgenIBD (>= 1.0.8)