seqminer
Efficiently Read Sequence Data (VCF Format, BCF Format, METAL Format and BGEN Format) into R
Integrate sequencing data (Variant call format, e.g. VCF or BCF) or meta-analysis results in R. This package can help you (1) read VCF/BCF/BGEN files by chromosomal ranges (e.g. 1:100-200); (2) read 'RareMETAL' summary statistics files; (3) read tables from a 'tabix'-indexed files; (4) annotate VCF/BCF files; (5) create customized workflow based on Makefile.
Versions across snapshots
| Version | Repository | File | Size |
|---|---|---|---|
9.9 |
rolling linux/jammy R-4.5 | seqminer_9.9.tar.gz |
2.4 MiB |
9.9 |
rolling linux/noble R-4.5 | seqminer_9.9.tar.gz |
2.2 MiB |
9.9 |
rolling source/ R- | seqminer_9.9.tar.gz |
4.4 MiB |
9.9 |
latest linux/jammy R-4.5 | seqminer_9.9.tar.gz |
2.4 MiB |
9.9 |
latest linux/noble R-4.5 | seqminer_9.9.tar.gz |
2.2 MiB |
9.9 |
latest source/ R- | seqminer_9.9.tar.gz |
4.4 MiB |
9.9 |
2026-04-26 source/ R- | seqminer_9.9.tar.gz |
4.4 MiB |
9.9 |
2026-04-23 source/ R- | seqminer_9.9.tar.gz |
4.4 MiB |
9.9 |
2026-04-09 windows/windows R-4.5 | seqminer_9.9.zip |
2.8 MiB |
9.7 |
2025-04-20 source/ R- | seqminer_9.7.tar.gz |
4.4 MiB |