scCATCH
Single Cell Cluster-Based Annotation Toolkit for Cellular Heterogeneity
An automatic cluster-based annotation pipeline based on evidence-based score by matching the marker genes with known cell markers in tissue-specific cell taxonomy reference database for single-cell RNA-seq data. See Shao X, et al (2020) <doi:10.1016/j.isci.2020.100882> for more details.
Versions across snapshots
| Version | Repository | File | Size |
|---|---|---|---|
3.2.2 |
rolling linux/jammy R-4.5 | scCATCH_3.2.2.tar.gz |
2.2 MiB |
3.2.2 |
rolling linux/noble R-4.5 | scCATCH_3.2.2.tar.gz |
2.2 MiB |
3.2.2 |
rolling source/ R- | scCATCH_3.2.2.tar.gz |
1.8 MiB |
3.2.2 |
latest linux/jammy R-4.5 | scCATCH_3.2.2.tar.gz |
2.2 MiB |
3.2.2 |
latest linux/noble R-4.5 | scCATCH_3.2.2.tar.gz |
2.2 MiB |
3.2.2 |
latest source/ R- | scCATCH_3.2.2.tar.gz |
1.8 MiB |
3.2.2 |
2026-04-26 source/ R- | scCATCH_3.2.2.tar.gz |
1.8 MiB |
3.2.2 |
2026-04-23 source/ R- | scCATCH_3.2.2.tar.gz |
1.8 MiB |
3.2.2 |
2026-04-09 windows/windows R-4.5 | scCATCH_3.2.2.zip |
2.2 MiB |
3.2.2 |
2025-04-20 source/ R- | scCATCH_3.2.2.tar.gz |
1.8 MiB |