Crandore Hub

rvHPDT

Calling Haplotype-Based and Variant-Based Pedigree Disequilibrium Test for Rare Variants in Pedigrees

To detecting rare variants for binary traits using general pedigrees, the pedigree disequilibrium tests are proposed by collapsing rare haplotypes/variants with/without weights. To run the test, MERLIN is needed in Linux for haplotyping.

Versions across snapshots

VersionRepositoryFileSize
4.0 rolling linux/jammy R-4.5 rvHPDT_4.0.tar.gz 89.5 KiB
4.0 rolling linux/noble R-4.5 rvHPDT_4.0.tar.gz 89.4 KiB
4.0 rolling source/ R- rvHPDT_4.0.tar.gz 19.6 KiB
4.0 latest linux/jammy R-4.5 rvHPDT_4.0.tar.gz 89.5 KiB
4.0 latest linux/noble R-4.5 rvHPDT_4.0.tar.gz 89.4 KiB
4.0 latest source/ R- rvHPDT_4.0.tar.gz 19.6 KiB
4.0 2026-04-26 source/ R- rvHPDT_4.0.tar.gz 19.6 KiB
4.0 2026-04-23 source/ R- rvHPDT_4.0.tar.gz 19.6 KiB
4.0 2026-04-09 windows/windows R-4.5 rvHPDT_4.0.zip 90.6 KiB
4.0 2025-04-20 source/ R- rvHPDT_4.0.tar.gz 19.6 KiB

Dependencies (latest)

Depends

Imports