r.jive
Perform JIVE Decomposition for Multi-Source Data
Performs the Joint and Individual Variation Explained (JIVE) decomposition on a list of data sets when the data share a dimension, returning low-rank matrices that capture the joint and individual structure of the data [O'Connell, MJ and Lock, EF (2016) <doi:10.1093/bioinformatics/btw324>]. It provides two methods of rank selection when the rank is unknown, a permutation test and a Bayesian Information Criterion (BIC) selection algorithm. Also included in the package are three plotting functions for visualizing the variance attributed to each data source: a bar plot that shows the percentages of the variability attributable to joint and individual structure, a heatmap that shows the structure of the variability, and principal component plots.
Versions across snapshots
| Version | Repository | File | Size |
|---|---|---|---|
2.4 |
rolling linux/jammy R-4.5 | r.jive_2.4.tar.gz |
3.8 MiB |
2.4 |
rolling linux/noble R-4.5 | r.jive_2.4.tar.gz |
3.8 MiB |
2.4 |
rolling source/ R- | r.jive_2.4.tar.gz |
4.6 MiB |
2.4 |
latest linux/jammy R-4.5 | r.jive_2.4.tar.gz |
3.8 MiB |
2.4 |
latest linux/noble R-4.5 | r.jive_2.4.tar.gz |
3.8 MiB |
2.4 |
latest source/ R- | r.jive_2.4.tar.gz |
4.6 MiB |
2.4 |
2026-04-26 source/ R- | r.jive_2.4.tar.gz |
4.6 MiB |
2.4 |
2026-04-23 source/ R- | r.jive_2.4.tar.gz |
4.6 MiB |
2.4 |
2026-04-09 windows/windows R-4.5 | r.jive_2.4.zip |
3.8 MiB |
2.4 |
2025-04-20 source/ R- | r.jive_2.4.tar.gz |
4.6 MiB |