popkin
Estimate Kinship and FST under Arbitrary Population Structure
Provides functions to estimate the kinship matrix of individuals from a large set of biallelic SNPs, and extract inbreeding coefficients and the generalized FST (Wright's fixation index). Method described in Ochoa and Storey (2021) <doi:10.1371/journal.pgen.1009241>.
Versions across snapshots
| Version | Repository | File | Size |
|---|---|---|---|
1.3.23 |
rolling linux/jammy R-4.5 | popkin_1.3.23.tar.gz |
1.0 MiB |
1.3.23 |
rolling linux/noble R-4.5 | popkin_1.3.23.tar.gz |
1.0 MiB |
1.3.23 |
rolling source/ R- | popkin_1.3.23.tar.gz |
853.3 KiB |
1.3.23 |
latest linux/jammy R-4.5 | popkin_1.3.23.tar.gz |
1.0 MiB |
1.3.23 |
latest linux/noble R-4.5 | popkin_1.3.23.tar.gz |
1.0 MiB |
1.3.23 |
latest source/ R- | popkin_1.3.23.tar.gz |
853.3 KiB |
1.3.23 |
2026-04-26 source/ R- | popkin_1.3.23.tar.gz |
853.3 KiB |
1.3.23 |
2026-04-23 source/ R- | popkin_1.3.23.tar.gz |
853.3 KiB |
1.3.23 |
2026-04-09 windows/windows R-4.5 | popkin_1.3.23.zip |
1.0 MiB |
1.3.23 |
2025-04-20 source/ R- | popkin_1.3.23.tar.gz |
853.3 KiB |