popPCR
Classify Digital PCR Droplets by Fitting Fluorescence Populations
Estimates DNA target concentration by classifying digital PCR (polymerase chain reaction) droplets as positive, negative, or rain, using Expectation-Maximization Clustering. The fitting is accomplished using the 'EMMIXskew' R package (v. 1.0.3) by Kui Wang, Angus Ng, and Geoff McLachlan (2018) as based on their paper "Multivariate Skew t Mixture Models: Applications to Fluorescence-Activated Cell Sorting Data" <doi:10.1109/DICTA.2009.88>.
Versions across snapshots
| Version | Repository | File | Size |
|---|---|---|---|
0.1.1.1 |
rolling linux/jammy R-4.5 | popPCR_0.1.1.1.tar.gz |
228.6 KiB |
0.1.1.1 |
rolling linux/noble R-4.5 | popPCR_0.1.1.1.tar.gz |
229.0 KiB |
0.1.1.1 |
rolling source/ R- | popPCR_0.1.1.1.tar.gz |
128.1 KiB |
0.1.1.1 |
latest linux/jammy R-4.5 | popPCR_0.1.1.1.tar.gz |
228.6 KiB |
0.1.1.1 |
latest linux/noble R-4.5 | popPCR_0.1.1.1.tar.gz |
229.0 KiB |
0.1.1.1 |
latest source/ R- | popPCR_0.1.1.1.tar.gz |
128.1 KiB |
0.1.1.1 |
2026-04-26 source/ R- | popPCR_0.1.1.1.tar.gz |
128.1 KiB |
0.1.1.1 |
2026-04-23 source/ R- | popPCR_0.1.1.1.tar.gz |
128.1 KiB |
0.1.1.1 |
2026-04-09 windows/windows R-4.5 | popPCR_0.1.1.1.zip |
235.1 KiB |
0.1.1.1 |
2025-04-20 source/ R- | popPCR_0.1.1.1.tar.gz |
128.1 KiB |