phyloatlas
Access to the 'Phylo-Species Atlas' of Empirical Phylogenies
Provides convenience functions to fetch standardized phylogenetic trees and per-tree provenance metadata from the 'Phylo-Species Atlas' <https://github.com/franciscorichter/phylo-species-atlas> directly from R. The atlas is a curated collection of empirical species-level trees covering Bacteria, Archaea, and Eukaryota, organized into 62 partitions of life with tip labels normalized against a shared dictionary of standardized species identifiers. Functions load any of the standardized trees with species labels resolved from the dictionary, list available trees, and inspect per-tree provenance.
Versions across snapshots
| Version | Repository | File | Size |
|---|---|---|---|
0.1.0 |
rolling linux/jammy R-4.5 | phyloatlas_0.1.0.tar.gz |
45.6 KiB |
0.1.0 |
rolling linux/noble R-4.5 | phyloatlas_0.1.0.tar.gz |
45.5 KiB |
0.1.0 |
rolling source/ R- | phyloatlas_0.1.0.tar.gz |
27.4 KiB |
0.1.0 |
latest linux/jammy R-4.5 | phyloatlas_0.1.0.tar.gz |
45.6 KiB |
0.1.0 |
latest linux/noble R-4.5 | phyloatlas_0.1.0.tar.gz |
45.5 KiB |
0.1.0 |
latest source/ R- | phyloatlas_0.1.0.tar.gz |
27.4 KiB |
0.1.0 |
2026-04-23 source/ R- | phyloatlas_0.1.0.tar.gz |
0 B |