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pegas

Population and Evolutionary Genetics Analysis System

Functions for reading, writing, plotting, analysing, and manipulating allelic and haplotypic data, including from VCF files, and for the analysis of population nucleotide sequences and micro-satellites including coalescent analyses, linkage disequilibrium, population structure (Fst, Amova) and equilibrium (HWE), haplotype networks, minimum spanning tree and network, and median-joining networks.

Versions across snapshots

VersionRepositoryFileSize
1.4 2026-04-09 windows/windows R-4.5 pegas_1.4.zip 828.0 KiB

Dependencies (latest)

Depends

  • ape (>= 5.3-11)

Imports

Suggests