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optimos.prime

Optimos Prime Helps Calculate Autoecological Data for Biological Species

Calculates autoecological data (optima and tolerance ranges) of a biological species given an environmental matrix. The package calculates by weighted averaging, using the number of occurrences to adjust the tolerance assigned to each taxon to estimate optima and tolerance range in cases where taxa have unequal occurrences. See the detailed methodology by Birks et al. (1990) <doi:10.1098/rstb.1990.0062>, and a case example by Potapova and Charles (2003) <doi:10.1046/j.1365-2427.2003.01080.x>.

Versions across snapshots

VersionRepositoryFileSize
0.1.2 rolling linux/jammy R-4.5 optimos.prime_0.1.2.tar.gz 49.5 KiB
0.1.2 rolling linux/noble R-4.5 optimos.prime_0.1.2.tar.gz 49.3 KiB
0.1.2 rolling source/ R- optimos.prime_0.1.2.tar.gz 20.6 KiB
0.1.2 latest linux/jammy R-4.5 optimos.prime_0.1.2.tar.gz 49.5 KiB
0.1.2 latest linux/noble R-4.5 optimos.prime_0.1.2.tar.gz 49.3 KiB
0.1.2 latest source/ R- optimos.prime_0.1.2.tar.gz 20.6 KiB
0.1.2 2026-04-26 source/ R- optimos.prime_0.1.2.tar.gz 20.6 KiB
0.1.2 2026-04-23 source/ R- optimos.prime_0.1.2.tar.gz 20.6 KiB
0.1.2 2026-04-09 windows/windows R-4.5 optimos.prime_0.1.2.zip 53.3 KiB
0.1.2 2025-04-20 source/ R- optimos.prime_0.1.2.tar.gz 20.6 KiB

Dependencies (latest)

Depends