kmer
Fast K-Mer Counting and Clustering for Biological Sequence Analysis
Contains tools for rapidly computing distance matrices and clustering large sequence datasets using fast alignment-free k-mer counting and recursive k-means partitioning. See Vinga and Almeida (2003) <doi:10.1093/bioinformatics/btg005> for a review of k-mer counting methods and applications for biological sequence analysis.
Versions across snapshots
| Version | Repository | File | Size |
|---|---|---|---|
1.1.3 |
rolling linux/jammy R-4.5 | kmer_1.1.3.tar.gz |
419.4 KiB |
1.1.3 |
rolling linux/noble R-4.5 | kmer_1.1.3.tar.gz |
420.6 KiB |
1.1.3 |
rolling source/ R- | kmer_1.1.3.tar.gz |
312.3 KiB |
1.1.3 |
latest linux/jammy R-4.5 | kmer_1.1.3.tar.gz |
419.4 KiB |
1.1.3 |
latest linux/noble R-4.5 | kmer_1.1.3.tar.gz |
420.6 KiB |
1.1.3 |
latest source/ R- | kmer_1.1.3.tar.gz |
312.3 KiB |
1.1.3 |
2026-04-26 source/ R- | kmer_1.1.3.tar.gz |
312.3 KiB |
1.1.3 |
2026-04-23 source/ R- | kmer_1.1.3.tar.gz |
312.3 KiB |
1.1.3 |
2026-04-09 windows/windows R-4.5 | kmer_1.1.3.zip |
739.4 KiB |
1.1.2 |
2025-04-20 source/ R- | kmer_1.1.2.tar.gz |
125.6 KiB |