iTOP
Inferring the Topology of Omics Data
Infers a topology of relationships between different datasets, such as multi-omics and phenotypic data recorded on the same samples. We based this methodology on the RV coefficient (Robert & Escoufier, 1976, <doi:10.2307/2347233>), a measure of matrix correlation, which we have extended for partial matrix correlations and binary data (Aben et al., 2018, <doi:10.1101/293993>).
Versions across snapshots
| Version | Repository | File | Size |
|---|---|---|---|
1.0.2 |
rolling linux/jammy R-4.5 | iTOP_1.0.2.tar.gz |
92.7 KiB |
1.0.2 |
rolling linux/noble R-4.5 | iTOP_1.0.2.tar.gz |
92.6 KiB |
1.0.2 |
rolling source/ R- | iTOP_1.0.2.tar.gz |
47.8 KiB |
1.0.2 |
latest linux/jammy R-4.5 | iTOP_1.0.2.tar.gz |
92.7 KiB |
1.0.2 |
latest linux/noble R-4.5 | iTOP_1.0.2.tar.gz |
92.6 KiB |
1.0.2 |
latest source/ R- | iTOP_1.0.2.tar.gz |
47.8 KiB |
1.0.2 |
2026-04-26 source/ R- | iTOP_1.0.2.tar.gz |
47.8 KiB |
1.0.2 |
2026-04-23 source/ R- | iTOP_1.0.2.tar.gz |
47.8 KiB |
1.0.2 |
2026-04-09 windows/windows R-4.5 | iTOP_1.0.2.zip |
95.8 KiB |
1.0.2 |
2025-04-20 source/ R- | iTOP_1.0.2.tar.gz |
47.8 KiB |