haplotyper
Tool for Clustering Genotypes in Haplotypes
Function to identify haplotypes within QTL (Quantitative Trait Loci). One haplotype is a combination of SNP (Single Nucleotide Polymorphisms) within the QTL. This function groups together all individuals of a population with the same haplotype. Each group contains individual with the same allele in each SNP, whether or not missing data. Thus, haplotyper groups individuals, that to be imputed, have a non-zero probability of having the same alleles in the entire sequence of SNP's. Moreover, haplotyper calculates such probability from relative frequencies.
Versions across snapshots
| Version | Repository | File | Size |
|---|---|---|---|
0.1 |
rolling source/ R- | haplotyper_0.1.tar.gz |
35.1 KiB |
0.1 |
rolling linux/jammy R-4.5 | haplotyper_0.1.tar.gz |
47.2 KiB |
0.1 |
rolling linux/noble R-4.5 | haplotyper_0.1.tar.gz |
47.2 KiB |
0.1 |
latest source/ R- | haplotyper_0.1.tar.gz |
35.1 KiB |
0.1 |
latest linux/jammy R-4.5 | haplotyper_0.1.tar.gz |
47.2 KiB |
0.1 |
latest linux/noble R-4.5 | haplotyper_0.1.tar.gz |
47.2 KiB |
0.1 |
2026-04-23 source/ R- | haplotyper_0.1.tar.gz |
35.1 KiB |
0.1 |
2026-04-09 windows/windows R-4.5 | haplotyper_0.1.zip |
51.1 KiB |
0.1 |
2025-04-20 source/ R- | haplotyper_0.1.tar.gz |
35.1 KiB |