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hapassoc

Inference of Trait Associations with SNP Haplotypes and Other Attributes using the EM Algorithm

The following R functions are used for inference of trait associations with haplotypes and other covariates in generalized linear models. The functions are developed primarily for data collected in cohort or cross-sectional studies. They can accommodate uncertain haplotype phase and handle missing genotypes at some SNPs.

Versions across snapshots

VersionRepositoryFileSize
1.2-9 rolling source/ R- hapassoc_1.2-9.tar.gz 232.7 KiB
1.2-9 rolling linux/jammy R-4.5 hapassoc_1.2-9.tar.gz 276.7 KiB
1.2-9 rolling linux/noble R-4.5 hapassoc_1.2-9.tar.gz 276.6 KiB
1.2-9 latest source/ R- hapassoc_1.2-9.tar.gz 232.7 KiB
1.2-9 latest linux/jammy R-4.5 hapassoc_1.2-9.tar.gz 276.7 KiB
1.2-9 latest linux/noble R-4.5 hapassoc_1.2-9.tar.gz 276.6 KiB
1.2-9 2026-04-23 source/ R- hapassoc_1.2-9.tar.gz 232.7 KiB
1.2-9 2026-04-09 windows/windows R-4.5 hapassoc_1.2-9.zip 282.1 KiB
1.2-9 2025-04-20 source/ R- hapassoc_1.2-9.tar.gz 232.7 KiB

Dependencies (latest)

Depends