func2vis
Clean and Visualize Over Expression Results from 'ConsensusPathDB'
Provides functions to have visualization and clean-up of enriched gene ontologies (GO) terms, protein complexes and pathways (obtained from multiple databases) using 'ConsensusPathDB' from gene set over-expression analysis. Performs clustering of pathway based on similarity of over-expressed gene sets and visualizations similar to Ingenuity Pathway Analysis (IPA) when up and down regulated genes are known. The methods are described in a paper currently submitted by Orecchioni et al, 2020 in Nanoscale.
Versions across snapshots
| Version | Repository | File | Size |
|---|---|---|---|
1.0-3 |
rolling source/ R- | func2vis_1.0-3.tar.gz |
232.9 KiB |
1.0-3 |
rolling linux/jammy R-4.5 | func2vis_1.0-3.tar.gz |
285.5 KiB |
1.0-3 |
latest source/ R- | func2vis_1.0-3.tar.gz |
232.9 KiB |
1.0-3 |
latest linux/jammy R-4.5 | func2vis_1.0-3.tar.gz |
285.5 KiB |
1.0-3 |
2026-04-23 source/ R- | func2vis_1.0-3.tar.gz |
232.9 KiB |
1.0-3 |
2026-04-09 windows/windows R-4.5 | func2vis_1.0-3.zip |
288.6 KiB |
1.0-3 |
2025-04-20 source/ R- | func2vis_1.0-3.tar.gz |
232.9 KiB |