epiworldR

Fast Agent-Based Epi Models

A flexible framework for Agent-Based Models (ABM), the 'epiworldR' package provides methods for prototyping disease outbreaks and transmission models using a 'C++' backend, making it very fast. It supports multiple epidemiological models, including the Susceptible-Infected-Susceptible (SIS), Susceptible-Infected-Removed (SIR), Susceptible-Exposed-Infected-Removed (SEIR), and others, involving arbitrary mitigation policies and multiple-disease models. Users can specify infectiousness/susceptibility rates as a function of agents' features, providing great complexity for the model dynamics. Furthermore, 'epiworldR' is ideal for simulation studies featuring large populations.

README

# Models included in epiworld

epiworld features multiple predefined models. The overall structure of the `models`
namespace is:

- It contains factory functions.

- The functions return `epiworld::Model` type objects.

The following models are included:

1. `models::ModelSIS` SIS 

2. `models::ModelSIR` SIR

3. `models::ModelSIRCONN` SIR connected graph

4. `models::ModelSEIRCONN` SEIR connected graph

5. `models::ModelSURV` Surveillance

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