easybio
Comprehensive Single-Cell Annotation and Transcriptomic Analysis Toolkit
Provides a comprehensive toolkit for single-cell annotation with the 'CellMarker2.0' database (see Xia Li, Peng Wang, Yunpeng Zhang (2023) <doi: 10.1093/nar/gkac947>). Streamlines biological label assignment in single-cell RNA-seq data and facilitates transcriptomic analysis, including preparation of TCGA<https://portal.gdc.cancer.gov/> and GEO<https://www.ncbi.nlm.nih.gov/geo/> datasets, differential expression analysis and visualization of enrichment analysis results. Additional utility functions support various bioinformatics workflows. See Wei Cui (2024) <doi: 10.1101/2024.09.14.609619> for more details.
Versions across snapshots
| Version | Repository | File | Size |
|---|---|---|---|
1.2.3 |
rolling source/ R- | easybio_1.2.3.tar.gz |
3.2 MiB |
1.2.3 |
latest source/ R- | easybio_1.2.3.tar.gz |
3.2 MiB |
1.2.3 |
2026-04-09 windows/windows R-4.5 | easybio_1.2.3.zip |
3.7 MiB |