colocPropTest
Proportional Testing for Colocalisation Analysis
Colocalisation analysis tests whether two traits share a causal genetic variant in a specified genomic region. Proportional testing for colocalisation has been previously proposed [Wallace (2013) <doi:10.1002/gepi.21765>], but is reimplemented here to overcome barriers to its adoption. Its use is complementary to the fine- mapping based colocalisation method in the 'coloc' package, and may be used in particular to identify false "H3" conclusions in 'coloc'.
Versions across snapshots
| Version | Repository | File | Size |
|---|---|---|---|
0.9.3 |
rolling linux/jammy R-4.5 | colocPropTest_0.9.3.tar.gz |
249.3 KiB |
0.9.3 |
rolling linux/noble R-4.5 | colocPropTest_0.9.3.tar.gz |
249.4 KiB |
0.9.3 |
rolling source/ R- | colocPropTest_0.9.3.tar.gz |
208.2 KiB |
0.9.3 |
latest linux/jammy R-4.5 | colocPropTest_0.9.3.tar.gz |
249.3 KiB |
0.9.3 |
latest linux/noble R-4.5 | colocPropTest_0.9.3.tar.gz |
249.4 KiB |
0.9.3 |
latest source/ R- | colocPropTest_0.9.3.tar.gz |
208.2 KiB |
0.9.3 |
2026-04-26 source/ R- | colocPropTest_0.9.3.tar.gz |
208.2 KiB |
0.9.3 |
2026-04-23 source/ R- | colocPropTest_0.9.3.tar.gz |
208.2 KiB |
0.9.3 |
2026-04-09 windows/windows R-4.5 | colocPropTest_0.9.3.zip |
251.6 KiB |
0.9.1 |
2025-04-20 source/ R- | colocPropTest_0.9.1.tar.gz |
207.8 KiB |