SuperCell
Simplification of scRNA-Seq Data by Merging Together Similar Cells
Aggregates large single-cell data into metacell dataset by merging together gene expression of very similar cells. 'SuperCell' uses 'velocyto.R' <doi:10.1038/s41586-018-0414-6> <https://github.com/velocyto-team/velocyto.R> for RNA velocity and 'WeightedCluster' <doi:10.12682/lives.2296-1658.2013.24> <https://mephisto.unige.ch/weightedcluster/> for weighted clustering on metacells. We also recommend installing 'scater' Bioconductor package <doi:10.18129/B9.bioc.scater> <https://bioconductor.org/packages/release/bioc/html/scater.html>.
Versions across snapshots
| Version | Repository | File | Size |
|---|---|---|---|
1.1 |
rolling linux/jammy R-4.5 | SuperCell_1.1.tar.gz |
3.3 MiB |
1.1 |
rolling linux/noble R-4.5 | SuperCell_1.1.tar.gz |
3.3 MiB |
1.1 |
rolling source/ R- | SuperCell_1.1.tar.gz |
3.6 MiB |
1.1 |
latest linux/jammy R-4.5 | SuperCell_1.1.tar.gz |
3.3 MiB |
1.1 |
latest linux/noble R-4.5 | SuperCell_1.1.tar.gz |
3.3 MiB |
1.1 |
latest source/ R- | SuperCell_1.1.tar.gz |
3.6 MiB |
1.1 |
2026-04-26 source/ R- | SuperCell_1.1.tar.gz |
3.6 MiB |
1.1 |
2026-04-23 source/ R- | SuperCell_1.1.tar.gz |
3.6 MiB |
1.1 |
2026-04-09 windows/windows R-4.5 | SuperCell_1.1.zip |
3.3 MiB |
1.0.1 |
2025-04-20 source/ R- | SuperCell_1.0.1.tar.gz |
3.6 MiB |