SMASH
Subclone Multiplicity Allocation and Somatic Heterogeneity
Cluster user-supplied somatic read counts with corresponding allele-specific copy number and tumor purity to infer feasible underlying intra-tumor heterogeneity in terms of number of subclones, multiplicity, and allocation (Little et al. (2019) <doi:10.1186/s13073-019-0643-9>).
Versions across snapshots
| Version | Repository | File | Size |
|---|---|---|---|
1.0.0 |
rolling linux/jammy R-4.5 | SMASH_1.0.0.tar.gz |
634.7 KiB |
1.0.0 |
rolling linux/noble R-4.5 | SMASH_1.0.0.tar.gz |
638.0 KiB |
1.0.0 |
rolling source/ R- | SMASH_1.0.0.tar.gz |
549.0 KiB |
1.0.0 |
latest linux/jammy R-4.5 | SMASH_1.0.0.tar.gz |
634.7 KiB |
1.0.0 |
latest linux/noble R-4.5 | SMASH_1.0.0.tar.gz |
638.0 KiB |
1.0.0 |
latest source/ R- | SMASH_1.0.0.tar.gz |
549.0 KiB |
1.0.0 |
2026-04-26 source/ R- | SMASH_1.0.0.tar.gz |
549.0 KiB |
1.0.0 |
2026-04-23 source/ R- | SMASH_1.0.0.tar.gz |
549.0 KiB |
1.0.0 |
2026-04-09 windows/windows R-4.5 | SMASH_1.0.0.zip |
1.0 MiB |
1.0.0 |
2025-04-20 source/ R- | SMASH_1.0.0.tar.gz |
549.0 KiB |