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SCINA

A Semi-Supervised Category Identification and Assignment Tool

An automatic cell type detection and assignment algorithm for single cell RNA-Seq and Cytof/FACS data. 'SCINA' is capable of assigning cell type identities to a pool of cells profiled by scRNA-Seq or Cytof/FACS data with prior knowledge of markers, such as genes and protein symbols that are highly or lowly expressed in each category. See Zhang Z, et al (2019) <doi:10.3390/genes10070531> for more details.

Versions across snapshots

VersionRepositoryFileSize
1.2.0 rolling linux/jammy R-4.5 SCINA_1.2.0.tar.gz 140.2 KiB
1.2.0 rolling linux/noble R-4.5 SCINA_1.2.0.tar.gz 140.1 KiB
1.2.0 rolling source/ R- SCINA_1.2.0.tar.gz 114.1 KiB
1.2.0 latest linux/jammy R-4.5 SCINA_1.2.0.tar.gz 140.2 KiB
1.2.0 latest linux/noble R-4.5 SCINA_1.2.0.tar.gz 140.1 KiB
1.2.0 latest source/ R- SCINA_1.2.0.tar.gz 114.1 KiB
1.2.0 2026-04-26 source/ R- SCINA_1.2.0.tar.gz 114.1 KiB
1.2.0 2026-04-23 source/ R- SCINA_1.2.0.tar.gz 114.1 KiB
1.2.0 2026-04-09 windows/windows R-4.5 SCINA_1.2.0.zip 140.1 KiB
1.2.0 2025-04-20 source/ R- SCINA_1.2.0.tar.gz 114.1 KiB

Dependencies (latest)

Depends