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PopVar

Genomic Breeding Tools: Genetic Variance Prediction and Cross-Validation

The main attribute of 'PopVar' is the prediction of genetic variance in bi-parental populations, from which the package derives its name. 'PopVar' contains a set of functions that use phenotypic and genotypic data from a set of candidate parents to 1) predict the mean, genetic variance, and superior progeny value of all, or a defined set of pairwise bi-parental crosses, and 2) perform cross-validation to estimate genome-wide prediction accuracy of multiple statistical models. More details are available in Mohammadi, Tiede, and Smith (2015, <doi:10.2135/cropsci2015.01.0030>). A dataset 'think_barley.rda' is included for reference and examples.

Versions across snapshots

VersionRepositoryFileSize
1.3.2 rolling linux/jammy R-4.5 PopVar_1.3.2.tar.gz 316.9 KiB
1.3.2 rolling linux/noble R-4.5 PopVar_1.3.2.tar.gz 316.8 KiB
1.3.2 rolling source/ R- PopVar_1.3.2.tar.gz 239.0 KiB
1.3.2 latest linux/jammy R-4.5 PopVar_1.3.2.tar.gz 316.9 KiB
1.3.2 latest linux/noble R-4.5 PopVar_1.3.2.tar.gz 316.8 KiB
1.3.2 latest source/ R- PopVar_1.3.2.tar.gz 239.0 KiB
1.3.2 2026-04-26 source/ R- PopVar_1.3.2.tar.gz 239.0 KiB
1.3.2 2026-04-23 source/ R- PopVar_1.3.2.tar.gz 239.0 KiB
1.3.2 2026-04-09 windows/windows R-4.5 PopVar_1.3.2.zip 318.7 KiB
1.3.2 2025-04-20 source/ R- PopVar_1.3.2.tar.gz 239.0 KiB

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