PhylogeneticEM
Automatic Shift Detection using a Phylogenetic EM
Implementation of the automatic shift detection method for Brownian Motion (BM) or Ornstein–Uhlenbeck (OU) models of trait evolution on phylogenies. Some tools to handle equivalent shifts configurations are also available. See Bastide et al. (2017) <doi:10.1111/rssb.12206> and Bastide et al. (2018) <doi:10.1093/sysbio/syy005>.
Versions across snapshots
| Version | Repository | File | Size |
|---|---|---|---|
1.8.1 |
rolling linux/jammy R-4.5 | PhylogeneticEM_1.8.1.tar.gz |
1.2 MiB |
1.8.1 |
rolling linux/noble R-4.5 | PhylogeneticEM_1.8.1.tar.gz |
1.2 MiB |
1.8.1 |
rolling source/ R- | PhylogeneticEM_1.8.1.tar.gz |
625.2 KiB |
1.8.1 |
latest linux/jammy R-4.5 | PhylogeneticEM_1.8.1.tar.gz |
1.2 MiB |
1.8.1 |
latest linux/noble R-4.5 | PhylogeneticEM_1.8.1.tar.gz |
1.2 MiB |
1.8.1 |
latest source/ R- | PhylogeneticEM_1.8.1.tar.gz |
625.2 KiB |
1.8.1 |
2026-04-26 source/ R- | PhylogeneticEM_1.8.1.tar.gz |
625.2 KiB |
1.8.1 |
2026-04-23 source/ R- | PhylogeneticEM_1.8.1.tar.gz |
625.2 KiB |
1.8.1 |
2026-04-09 windows/windows R-4.5 | PhylogeneticEM_1.8.1.zip |
1.5 MiB |
1.8.0 |
2025-04-20 source/ R- | PhylogeneticEM_1.8.0.tar.gz |
625.2 KiB |