PeakSegDisk
Disk-Based Constrained Change-Point Detection
Disk-based implementation of Functional Pruning Optimal Partitioning with up-down constraints <doi:10.18637/jss.v101.i10> for single-sample peak calling (independently for each sample and genomic problem), can handle huge data sets (10^7 or more).
Versions across snapshots
| Version | Repository | File | Size |
|---|---|---|---|
2024.10.1 |
rolling linux/jammy R-4.5 | PeakSegDisk_2024.10.1.tar.gz |
721.8 KiB |
2024.10.1 |
rolling linux/noble R-4.5 | PeakSegDisk_2024.10.1.tar.gz |
722.1 KiB |
2024.10.1 |
rolling source/ R- | PeakSegDisk_2024.10.1.tar.gz |
671.5 KiB |
2024.10.1 |
latest linux/jammy R-4.5 | PeakSegDisk_2024.10.1.tar.gz |
721.8 KiB |
2024.10.1 |
latest linux/noble R-4.5 | PeakSegDisk_2024.10.1.tar.gz |
722.1 KiB |
2024.10.1 |
latest source/ R- | PeakSegDisk_2024.10.1.tar.gz |
671.5 KiB |
2024.10.1 |
2026-04-26 source/ R- | PeakSegDisk_2024.10.1.tar.gz |
671.5 KiB |
2024.10.1 |
2026-04-23 source/ R- | PeakSegDisk_2024.10.1.tar.gz |
671.5 KiB |
2024.10.1 |
2026-04-09 windows/windows R-4.5 | PeakSegDisk_2024.10.1.zip |
1.0 MiB |
2024.10.1 |
2025-04-20 source/ R- | PeakSegDisk_2024.10.1.tar.gz |
671.5 KiB |
Dependencies (latest)
Imports
- data.table (>= 1.9.8)