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ML.MSBD

Maximum Likelihood Inference on Multi-State Trees

Inference of a multi-states birth-death model from a phylogeny, comprising a number of states N, birth and death rates for each state and on which edges each state appears. Inference is done using a hybrid approach: states are progressively added in a greedy approach. For a fixed number of states N the best model is selected via maximum likelihood. Reference: J. Barido-Sottani, T. G. Vaughan and T. Stadler (2018) <doi:10.1098/rsif.2018.0512>.

Versions across snapshots

VersionRepositoryFileSize
1.2.1 rolling linux/jammy R-4.5 ML.MSBD_1.2.1.tar.gz 297.2 KiB
1.2.1 rolling linux/noble R-4.5 ML.MSBD_1.2.1.tar.gz 297.1 KiB
1.2.1 rolling source/ R- ML.MSBD_1.2.1.tar.gz 236.0 KiB
1.2.1 latest linux/jammy R-4.5 ML.MSBD_1.2.1.tar.gz 297.2 KiB
1.2.1 latest linux/noble R-4.5 ML.MSBD_1.2.1.tar.gz 297.1 KiB
1.2.1 latest source/ R- ML.MSBD_1.2.1.tar.gz 236.0 KiB
1.2.1 2026-04-26 source/ R- ML.MSBD_1.2.1.tar.gz 236.0 KiB
1.2.1 2026-04-23 source/ R- ML.MSBD_1.2.1.tar.gz 236.0 KiB
1.2.1 2026-04-09 windows/windows R-4.5 ML.MSBD_1.2.1.zip 295.8 KiB
1.2.1 2025-04-20 source/ R- ML.MSBD_1.2.1.tar.gz 236.0 KiB

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