Crandore Hub

MKomics

Omics Data Analysis

Similarity plots based on correlation and median absolute deviation (MAD); adjusting colors for heatmaps; aggregate technical replicates; calculate pairwise fold-changes and log fold-changes; compute one- and two-way ANOVA; simplified interface to package 'limma' (Ritchie et al. (2015), <doi:10.1093/nar/gkv007> ) for moderated t-test and one-way ANOVA; Hamming and Levenshtein (edit) distance of strings as well as optimal alignment scores for global (Needleman-Wunsch) and local (Smith-Waterman) alignments with constant gap penalties (Merkl and Waack (2009), ISBN:978-3-527-32594-8).

Versions across snapshots

VersionRepositoryFileSize
0.7 rolling linux/jammy R-4.5 MKomics_0.7.tar.gz 294.5 KiB
0.7 rolling linux/noble R-4.5 MKomics_0.7.tar.gz 294.5 KiB
0.7 rolling source/ R- MKomics_0.7.tar.gz 294.5 KiB
0.7 latest linux/jammy R-4.5 MKomics_0.7.tar.gz 294.5 KiB
0.7 latest linux/noble R-4.5 MKomics_0.7.tar.gz 294.5 KiB
0.7 latest source/ R- MKomics_0.7.tar.gz 294.5 KiB
0.7 2026-04-26 source/ R- MKomics_0.7.tar.gz 294.5 KiB
0.7 2026-04-23 source/ R- MKomics_0.7.tar.gz 294.5 KiB
0.7 2025-04-20 source/ R- MKomics_0.7.tar.gz 294.5 KiB

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