Hapi
Inference of Chromosome-Length Haplotypes Using Genomic Data of Single Gamete Cells
Inference of chromosome-length haplotypes using a few haploid gametes of an individual. The gamete genotype data may be generated from various platforms including genotyping arrays and sequencing even with low-coverage. Hapi simply takes genotype data of known hetSNPs in single gamete cells as input and report the high-resolution haplotypes as well as confidence of each phased hetSNPs. The package also includes a module allowing downstream analyses and visualization of identified crossovers in the gametes.
Versions across snapshots
| Version | Repository | File | Size |
|---|---|---|---|
0.0.3 |
rolling source/ R- | Hapi_0.0.3.tar.gz |
870.8 KiB |
0.0.3 |
rolling linux/jammy R-4.5 | Hapi_0.0.3.tar.gz |
723.2 KiB |
0.0.3 |
rolling linux/noble R-4.5 | Hapi_0.0.3.tar.gz |
723.0 KiB |
0.0.3 |
latest source/ R- | Hapi_0.0.3.tar.gz |
870.8 KiB |
0.0.3 |
latest linux/jammy R-4.5 | Hapi_0.0.3.tar.gz |
723.2 KiB |
0.0.3 |
latest linux/noble R-4.5 | Hapi_0.0.3.tar.gz |
723.0 KiB |
0.0.3 |
2026-04-23 source/ R- | Hapi_0.0.3.tar.gz |
870.8 KiB |
0.0.3 |
2026-04-09 windows/windows R-4.5 | Hapi_0.0.3.zip |
724.3 KiB |
0.0.3 |
2025-04-20 source/ R- | Hapi_0.0.3.tar.gz |
870.8 KiB |