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DDD

Diversity-Dependent Diversification

Implements maximum likelihood and bootstrap methods based on the diversity-dependent birth-death process to test whether speciation or extinction are diversity-dependent, under various models including various types of key innovations. See Etienne et al. 2012, Proc. Roy. Soc. B 279: 1300-1309, <DOI:10.1098/rspb.2011.1439>, Etienne & Haegeman 2012, Am. Nat. 180: E75-E89, <DOI:10.1086/667574>, Etienne et al. 2016. Meth. Ecol. Evol. 7: 1092-1099, <DOI:10.1111/2041-210X.12565> and Laudanno et al. 2021. Syst. Biol. 70: 389–407, <DOI:10.1093/sysbio/syaa048>. Also contains functions to simulate the diversity-dependent process.

Versions across snapshots

VersionRepositoryFileSize
5.2.4 rolling linux/jammy R-4.5 DDD_5.2.4.tar.gz 564.7 KiB
5.2.4 rolling linux/noble R-4.5 DDD_5.2.4.tar.gz 565.8 KiB
5.2.4 rolling source/ R- DDD_5.2.4.tar.gz 93.8 KiB
5.2.4 latest linux/jammy R-4.5 DDD_5.2.4.tar.gz 564.7 KiB
5.2.4 latest linux/noble R-4.5 DDD_5.2.4.tar.gz 565.8 KiB
5.2.4 latest source/ R- DDD_5.2.4.tar.gz 93.8 KiB
5.2.4 2026-04-26 source/ R- DDD_5.2.4.tar.gz 93.8 KiB
5.2.4 2026-04-23 source/ R- DDD_5.2.4.tar.gz 93.8 KiB
5.2.4 2026-04-09 windows/windows R-4.5 DDD_5.2.4.zip 900.4 KiB
5.2.2 2025-04-20 source/ R- DDD_5.2.2.tar.gz 91.0 KiB

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