CpGFilter
CpG Filtering Method Based on Intra-Class Correlation Coefficients
Filter CpGs based on Intra-class Correlation Coefficients (ICCs) when replicates are available. ICCs are calculated by fitting linear mixed effects models to all samples including the un-replicated samples. Including the large number of un-replicated samples improves ICC estimates dramatically. The method accommodates any replicate design.
Versions across snapshots
| Version | Repository | File | Size |
|---|---|---|---|
1.1 |
2026-04-09 windows/windows R-4.5 | CpGFilter_1.1.zip |
20.0 KiB |